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Student Publication Database

This database contains publications of UCI MSTP alumni and current students. Note that database may not contain most recent publications. It is the responsibility of students to enter their publication information into the database.
Most Recent Publication Database Entry
Sepehr A, Djalilian HR, Chang JE, Chen Z, Wong BJ, Optical Coherence Tomography of the Cochlea in the Porcine Model. Laryngoscope  (2008), 2008 May 15. [Epub ahead of print].

Number of Articles in Database
 381

 
Top 10 Most Recent Journals Published in
.
The Association for Research in Otolaryngology 31st MidWinter Meeting
Arch Facial Plast Surg.
American College of Sports Medicine 54th Annual Meeting
American College of Sports Medicine 54th Annual Meeting
Experimental Biology Annual Meeting
Experimental Biology Annual Meeting
American College of Sports Medicine 54th Annual Meeting
Aviation, Space, and Environmental Medicine
American Diabetes Association 68th Scientific Sessions
   
Publications (Sorted by Year)
Please refer to http://www.ics.uci.edu/~chenjh for the most up-to-date information, including papers, presentations and awards.. .. . ( 2010), ..
Huang, J., Chang, J.E., Zeng, F.G. Using Vibrotactile Stimulation to Enhance Mandarin. The Association for Research in Otolaryngology 31st MidWinter Meeting ( 2008), Phoenix, AZ.
Da Costa, V., Wei, R., Lim, R., Sun, C-H., Brown, J., Wong, B. . Nondestructive Imaging of Live Human Keloid and Facial Tissue Using Multiphoton Microscopy. Arch Facial Plast Surg. ( 2008), 10(1): 38-43.
(Abstract) Oliver SR, Rosa JS, Lee JS, Pontello AM, Graf SC, Flores RL, Galassetti PR. Oxidative stress mechanisms during intermittent exercise in normal and overweight children. American College of Sports Medicine 54th Annual Meeting ( 2008), poster presentation and catalog publication.
(Abstract) Rosa JS, Schwindt CD, Oliver SR, Leu S, Zaldivar FP, Galassetti PR. Rapid post-exercise correction of neutrophilia in healthy, type 1 diabetic, obese, and asthmatic Children. American College of Sports Medicine 54th Annual Meeting ( 2008), poster presentation and catalog publication.
(Abstract) Lee JS, Oliver SR, Rosa JS, Pontello AM, Graf SC, Galassetti PR. Comparison of physical fitness in type 1 diabetic and healthy children matched by age, gender, and BMI. Experimental Biology Annual Meeting ( 2008), poster presentation and catalog publication.
(Abstract) Rosa JS, Oliver SR, Lee JS, Flores RL, Ibardolaza M, Zaldivar FP, Galassetti PR. Circulatory interleukin-6 is elevated in overweight compared to healthy and type 1 diabetic children. Experimental Biology Annual Meeting ( 2008), poster presentation and catalog publication.
(Abstract) Rosa JS, Oliver SR, Flores RL, Leu S, Pontello AM, Galassetti PR. Rapid post-exercise correction of neutrophilia in healthy, type 1 diabetic, obese, and asthmatic children. American College of Sports Medicine 54th Annual Meeting ( 2008), poster presentation and catalog publication.
Summers SM, Ulloa AS, Purdy RE.. Endothelial role in the thoracic aorta response to hindlimb unloading in rats. Aviation, Space, and Environmental Medicine ( 2008), 78: 1103-1107.
(Abstract) Lee JS, Newcomb RL, Blake DR, Meinardi S, Midyett JR, Rosa JS, Galassetti PR. Predictive models for plasma glucose using exhaled volatile organic compounds. American Diabetes Association 68th Scientific Sessions ( 2008), poster presentation and catalog publication.
(Abstract) Oliver SR, Rosa JS, Pontello AM, Flores RL, Zaldivar FP, Bachman G, Galassetti PR. Dyslipidemia and increased oxidative stress in normo-insulinemic overweight children. American Diabetes Association 68th Scientific Sessions ( 2008), oral presentation and catalog publication.
(Abstract) Rosa JS, Oliver SR, Flores RL, Leu S, Pontello AM, Graf SC, Galassetti PR. Elevated baseline IL-6 and altered IL-6 response to exercise in overweight compared to healthy and type 1 diabetic children. American Diabetes Association 68th Scientific Sessions ( 2008), poster presentation and catalog publication.
Rosa JS, Schwindt CD, Oliver SR, Leu SY, Flores RL, Galassetti PR. Rapid post-exercise correction of neutrophilia in healthy, type 1 diabetic, obese, and asthmatic children. Exercise Science ( 2008), submitted.
(Abstract) Rosa JS, Mitsuhashi M, Flores RL, Pontello AM, Barnett M, Zaldivar FP, Galassetti PR. Elevated ex-vivo gene expression of 9 inflammatory mediators in leukocytes of type 1 diabetic compared to overweight and healthy children. American Diabetes Association 68th Scientific Sessions ( 2008), poster presentation and catalog publication.
Rosa JS, Oliver SR, Mitsuhashi M, Flores RL, Pontello AM, Zaldivar FP, Galassetti PR. Altered kinetics of IL-6 and other inflammatory mediators during exercise in children with type 1 diabetes. Journal of Investigative Medicine ( 2008), in press.
Rosa JS, Flores RL, Oliver SR, Pontello AM, Zaldivar FP, Galassetti PR. Sustained IL-1α, IL-4, IL-6 elevations following correction of hyperglycemia in children with type 1 diabetes mellitus. Pediatric Diabetes ( 2008), 9(1):9-16.
Rosencrans R, Wang X, Winter WR, Zhao S. Estimates for the principal Dirichlet eigenvalue of anisotropic elliptic operator on a ball and their applications. Siam Journal of Applied Mathematics ( 2008), submitted.
A. Razmara, L. Sunday, C. Stirone, X.B. Wang, D.N. Krause, S.P. Duckles, and V. Procaccio. Mitochondrial Effects of Estrogen are Mediated by ERα in Brain Endothelial Cells. Journal of Pharmacology and Experimental Therapeutics ( 2008), Epub March 19.
R. Benz. S. J. Swamidass, and P. F. Baldi. The discovery of Power-law distributions in chemistry. J Chem Inf Model ( 2008), Submitted.
H.Q. Le, J.T. Wong, and S. Molloi. Allometric scaling in the coronary arterial system. The International Journal of Cardiovascular Imaging ( 2008), [Epub ahead of print].
Huy Q. Le, Jerry T. Wong and Sabee Molloi. Allometric scaling in the coronary arterial system. The International Journal of Cardiovascular Imaging ( 2008), Published online: 20 March 2008.
J.T. Wong and S. Molloi. Determination of fractional flow reserve based on scaling laws: a simulation study. Physics in Medicine and Biology ( 2008), [accepted].
H. Le, J.T. Wong, and S. Molloi. Estimation of regional myocardial mass at risk based on distal arterial lumen volume and length using 3D micro-CT images. Computerized Medical Imaging and Graphics ( 2008), [accepted].
H. Le, J.T. Wong, and S. Molloi. Estimation of regional myocardial mass at risk based on distal arterial lumen volume and length using 3D micro-CT images.. Computerized Medical Imaging and Graphics ( 2008), accepted.
Sepehr A, Djalilian HR, Chang JE, Chen Z, Wong BJ. Optical Coherence Tomography of the Cochlea in the Porcine Model. Laryngoscope ( 2008), 2008 May 15. [Epub ahead of print].
(Abstract) Rosa JS, Oliver SR, Pontello AM, Flores RL, Zaldivar FP, Galassetti PR. Kinetics of inflammatory mediators during and following exercise in diabetic and non-diabetic children. American Diabetes Association 67th Scientific Sessions; 21st Annual National M.D./Ph.D. Student Conference ( 2007), poster presentations and catalog publications.
(Abstract) Rosa JS, Galassetti PR, Oliver SR, Pontello AM, Flores RL, Zaldivar FP, Mitsuhashi M. Changes in COX-2 and HSP-70 mRNA following exercise in diabetic and non-diabetic children. Experimental Biology Annual Meeting ( 2007), poster presentation and catalog publication.
Garrod KR, Wei SH, Parker I, and Cahalan MD. Natural killer cells actively patrol peripheral lymph nodes forming stable conjugates to eliminate MHC-mismatched targets. Proc Natl Acad Sci U S A ( 2007), published online July 3, 2007, 10.1073/pnas.0702867104 ( Immunology ) .
Wei SH, Safrina O, Yu Y, Garrod KR, Cahalan MD, Parker I. Ca2+ signals in CD4+ T cells during early contacts with antigen-bearing dendritic cells in lymph node. J. Immunol. ( 2007), 179: 1586-94.
Stickney, G.S., Assmann, P.F., Chang, J.E., Zeng, F.G.. Effects of cochlear implant processing and fundamental frequency on the intelligibility of competing sentences. JASA ( 2007), 122(2): 1069-1078.
Echegoyen J, Neu A, Graber KD, Soltesz I.. Homeostatic plasticity studied using in vivo hippocampal activity-blockade: synaptic scaling, intrinsic plasticity and age-dependence.. PLOS one ( 2007), Aug 8;2:e700..
Chen K, Neu A, Howard AL, Foldy C, Echegoyen J, Hilgenberg L, Smith M, Mackie K, Soltesz I.. Prevention of plasticity of endocannabinoid signaling inhibits persistent limbic hyperexcitability caused by developmental seizures.. Journal of Neuroscience ( 2007), Jan 3;27(1):46-58.
Howard AL, Neu A, Morgan RJ, Echegoyen JC, Soltesz I.. Opposing modifications in intrinsic currents and synaptic inputs in post-traumatic mossy cells: evidence for single-cell homeostasis in a hyperexcitable network.. Journal of Neurophysiology ( 2007), Mar;97(3):2394-409.
Prudova A, Albin M, Bauman Z, Lin A, Vitvitsky V, Banerjee R. Testosterone regulation of homocysteine metabolism modulates redox status in human prostate cancer cells. Antioxid Redox Signal ( 2007), 2007 Nov;9(11):1875-82.
Patel S, Kurpinski K, Quigley R, Gao H, Hsiao BS, Poo MM, Li S.. Bioactive nanofibers: synergistic effects of nanotopography and chemical signaling on cell guidance.. Nano Letters ( 2007), 2007 Jul;7(7):2122-8.
Ehlert FJ, Ahn S, Pak KJ, Park GJ, Sangnil MS, Tran JA, Matsui M. . Neuronally Released Acetylcholine Acts on the M2 Muscarinic Receptor to Oppose the Relaxant Effect of Isoproterenol on Cholinergic Contractions in Mouse Urinary Bladder.. Journal of Pharmacology and Experimental Therapeutics. ( 2007), 322(2):631-37. .
(Abstract) Rosa JS, Oliver SR, Pontello AM, Flores RL, Zaldivar FP, Galassetti PR. Systemic cytokine changes in children during prolonged intense exercise. American College of Sports Medicine 54th Annual Meeting ( 2007), poster presentation and catalog publication.
(Abstract) Galassetti PR, Oliver SR, Midyett J, Flores RL, Pontello AM, Rosa JS, Blake DR. Exhaled volatile organic compounds during hyperglycemia and euglycemia/hyperinsulinemia in healthy males. American Diabetes Association 67th Scientific Sessions ( 2007), poster presentation and catalog publication.
Chloé-Agathe Azencott, Alexandre Ksikes, S. Joshua Swamidass, Jonathan Chen, Liva Ralaivola, and Pierre Baldi. One- to Four-Dimensional Kernels for Small Molecules and Predictive Regression of Physical, Chemical, and Biological Properties. Journal of Chemical Informatics and Modeling ( 2007), 47(3):965-974.
(Abstract) Oliver SR, Flores RL, Pontello AM, Rosa JS, Zaldivar FP, Galassetti PR. Physiological hyperinsulinemia, independent of hyperglycemia, suppresses sCD40L, EGF, and IP-10 in healthy adults. American Diabetes Association 67th Scientific Sessions ( 2007), oral presentation and catalog publication.
(Abstract) Galassetti PR, Rosa JS, Oliver SR, Flores RL, Pontello AM, Graf SC, Mitsuhashi M. Increased ex-vivo leukocyte mRNA expression of inflammatory cytokines/chemokines in type 1 diabetic children. American Diabetes Association 67th Scientific Sessions ( 2007), poster presentation and catalog publication.
Jonathan H. Chen, Erik Linstead, S. Joshua Swamidass, Dennis Wang, and Pierre Baldi. ChemDB Update - Full-Text Search and Virtual Chemical Space. Bioinformatics ( 2007), 23(17):2348-2351.
(Abstract) Rosa JS, Oliver SR, Flores RL, Mitsuhashi M, Pontello AM, Graf SC, Galassetti PR. Exercise-induced leukocyte response and changes in VEGF mRNA expression in healthy and type 1 diabetic children. American Diabetes Association 67th Scientific Sessions ( 2007), poster presentation and catalog publication.
Rosa JS, Oliver SR, Flores RL, Graf SC, Pontello AM, Ibardolaza M, Zaldivar FP, Galassetti PR. Kinetic profiles of 18 systemic pro- and anti-inflammatory mediators during and following exercise in children. Journal of Pediatric Endocrinology & Metabolism ( 2007), 20(12): 1293-1305.
Srinivasan R, Winter WR, Nunez PL. EEG and MEG coherence: measures of functional connectivity at distinct spatial scales of neocortical dynamics. Journal of Neuroscience Methods ( 2007), Volume 166, Issue 1, , 15 October 2007, Pages 41-52..
Winter WR, Nunez PL, Ding J, Srinivasan R. Comparison of the effect of volume conduction on EEG coherence with the effect of field spread on MEG coherence. Statistics in Medicine ( 2007), Volume 26, Issue 21, pages 3946-3957.
A. Razmara, D.N. Krause, S.P. Duckles, and V. Procaccio. Estrogen Suppresses Brain Mitochondrial Oxidative Stress in Female and Male Rats. Brain Research ( 2007), 1176C: 71-81.
C.-A. Azencott, A. Ksikes, S. J. Swamidass, J. H. Chen, L. Ralaivola, and P. Baldi. One- to four-dimensional kernels for virtual screening and the prediction of physical, chemical, and biological properties. J Chem Inf Model ( 2007), 47(3):965-974.
S. J. Swamidass and P. Baldi.. Mathematical correction for fingerprint similarity measures to improve chemical retrieval.. J Chem Inf Model ( 2007), 47(3):952-964.
J. Chen, E. Linstead, S. J. Swamidass, D. Wang, and P. F. Baldi. ChemDB update - full-text search and virtual chemical space. . Bioinformatics ( 2007), .
P. F. Baldi, R. W. Benz, D. S. Hirschberg, S. J. Swamidass . Lossless Compression of Chemical Fingerprints Using Integer Entropy Codes Improves Storage and Retrieval. J Chem Inf Model ( 2007), .
S. Molloi and J.T. Wong. Regional blood flow analysis and its relationship with arterial branch lengths and lumen volume in coronary arterial tree. Physics in Medicine and Biology ( 2007), 52: p. 1495-1503.
J.T. Wong, F. Kamyar, and S. Molloi. Quantitative coronary angiography using image recovery techniques for background estimation in unsubtracted images. Medical Physics ( 2007), 34(10): p. 4003-15.
Dogan I, Puckett JL, Padda BS and Mittal RK. Prevalence of increased esophageal muscle thickness in patients with esophageal symptoms. Am J Gastroenterol ( 2007), 102(1):137-45.
Lee, D.J. and Robinson, W.E., Jr. . Preliminary mapping of a putative inhibitor binding pocket for human immunodeficiency virus type 1 integrase inhibitors. Antimicrob. Agents Chemother. ( 2006), 50:134-142 .
Charvat, T.T., Lee, D.J., Robinson, W.E., Jr., and Chamberlin, A.R.. Design, synthesis, and biological evaluation of chicoric acid analogs as inhibitors of HIV-1 integrase. Bioorg. Med. Chem ( 2006), In Press.
Sanna MG, Wang SK, Gonzalez-Cabrera PJ, Don A, Marsolais D, Matheu MP, Wei SH, Parker I, Jo E, Cheng WC, Cahalan MD, Wong CH, Rosen H. . Enhancement of capillary leakage and restoration of lymphocyte egress by a chiral S1P(1) antagonist in vivo.. Nature Chemical Biology ( 2006), 2(8):434-41.
Armstrong CM, DeVito LM, Cleland TA. One-trial Associative Odor Learning in Neonatal Mice. Chemical Senses ( 2006), 31(4): 343-349.
(Abstract) Galassetti PR, Rosa JS, Flores RL, Pontello AM, Larson JK, Mitsuhashi M. Reduced baseline and post-exercise leukocyte mRNA expression of inflammatory cytokines in type 1 DM children during ex-vivo incubation. American Diabetes Association 66th Scientific Sessions ( 2006), poster presentation and catalog publication.
(Abstract) Galassetti PR, Rosa JS, Zaldivar FP, Pontello AM, Flores RL, Mitsuhashi M. Exercise induces leukocyte mRNA expression of inflammatory mediators in type 1 DM children. American Diabetes Association 66th Scientific Sessions ( 2006), catalog publication.
(Abstract) Galassetti PR, Flores RL, Larson JK, Zaldivar FP, Barnett M, Rosa JS. Prolonged effect of hyperglycemia on circulating pro-inflammatory cytokines in children with type 1 diabetes. American Diabetes Association 66th Scientific Sessions ( 2006), oral presentation and catalog publication.
(Abstract) Rosa JS, Flores RL, Pontello AM, Zaldivar FP, Culler FL, Galassetti PR. Pro-/anti-inflammatory cytokine kinetics during acute exercise in type 1 DM children. American Diabetes Association 66th Scientific Sessions ( 2006), catalog publication, 2006.
Oak JS, Deane JA, Kharas MG, Luo J, Lane TE, Cantley LC, Fruman DA. Sjogren's syndrome-like disease in mice with T cells lacking class 1A phosphoinositide-3-kinase.. Proc Natl Acad Sci U S A ( 2006), .
Jean S. Oak, Jonathan A. Deane, Ji Luo, Lewis C. Cantley, and David A. Fruman. A role for phosphoinositide 3-kinase p85beta in B cell development and function. UCI Immunology Fair ( 2006), .
Jean S. Oak, Jonathan A. Deane, Michael G. Kharas, Linda N. Stiles, Ji Luo*, Lewis C. Cantley*, Thomas E. Lane and David A. Fruman. Deletion of Class IA Phosphoinositide 3-Kinase Leads to Dysregulation of T cell Tolerance and the Development of Primary Sjogren’s syndrome. Gene Regulation and Signaling in the Immune System ( 2006), .
Chen MJ, Ivy AS, Russo-Neustadt AA.. Nitric oxide synthesis is required for exercise-induced increases in hippocampal BDNF and phophatidylinositol 3' kinase expression.. Brain Research Bulletin ( 2006), Jan 15; 68(4):257-68..
Chang, J.E., Bai, J.Y., Zeng, F.G.. Unintelligible low-frequency sound enhances simulated cochlear-implant speech recognition in noise. IEEE Trans Biomed Eng ( 2006), 53(12):2598-2601.
Deane JA, Kharas MG, Oak JS, Stiles LN, Luo J, Moore TI, Ji H, Rommel C, Cantley LC, Lane TE, Fruman DA. T cell function is partially maintained in the absence of class IA phosphoinositide 3-kinase signaling. Blood ( 2006), Dec 12; [Epub ahead of print].
L. Ralaivola, S. J. Swamidass, H. Saigo, and P. Baldi.. Graph Kernels for Chemical Informatics.. Neural Networks ( 2006), 18:1093-110.
T. Lin, M. Melgar, S. J. Swamidass, J. Purdon, T. Tseng, G. Gago, D. Kurth, P. Baldi, H. Gramajo, and S. Tsai.. Structure-Based Inhibitor Design of AccD5, an Essential acyl-CoA Carboxylase Carboxyltransferase Domain of Mycobacterium tuberculosis. . Proceedings of the National Academy of Sciences ( 2006), .
S. J. Swamidass and P. Baldi.. Bounds and Algorithms for Fast Exact Searches of Chemical Fingerprints in Linear and Sub-Linear Time. . The Journal of Chemical Informatics and Modeling. ( 2006), .
Srinivasan R, Winter WR, Nunez PL. Source analysis of EEG oscillations using high resolution EEG and MEG. Progress in Brain Research ( 2006), Volume 159, pages 29-42.
S. A. Danziger, S. J. Swamidass, J. Zeng, L. R. Dearth, Q. Lu, J. H. Chen, J. Cheng, V. P. Hoang, H. Saigo, R. Luo, P. Baldi, R. K. Brachmann, and R. H. Lathrop.. Functional census of mutation sequence spaces: the example of p53 cancer rescue mutants. . IEEE/ACM Trans Comput Biol Bioinform ( 2006), 3(2):114-125.
M. Movahed, J. Wong, and S. Molloi. Removal of iodine contrast from coronary sinus in swine during coronary angiography. Journal of the American College of Cardiology ( 2006), 47: p. 465-467.
J.T. Wong, J.L. Ducote, T. Xu, M.T. Hassanein, and S. Molloi. Automated technique for angiographic determination of coronary blood flow and lumen volume. Academic Radiology ( 2006), 13(2): p. 186-94.
T. Xu, J.L. Ducote, J.T. Wong, and S. Molloi. Feasibility of real time dual-energy imaging based on a flat panel detector for coronary artery calcium quantification. Medical Physics ( 2006), 33(6): p. 1612-22.
T. Xu, J.T. Wong, P.M. Shikhaliev, J.L. Ducote, M.S.A.L. Al-Ghazi, and S. Molloi. Real-time tumor tracking using implanted positron emission markers: concept and simulation study. Medical Physics ( 2006), 33(7): p. 2598-2609.
Tipnis NA, Liu J, Puckett JL and Mittal RK. Common cavity pressure during gastro-esophageal reflux: reassessment using simultaneous pressure, impedance and ultrasound imaging. Am J Physiol Gastrointest Liver Physiol ( 2006), 290(6):G1149-56.
Vargas, G. A., Fantino, E., George-Nascimento, C., Gargus, J.J., and Haigler, H.T. Reduced Epidermal Growth Factor Receptor Expression in Hypohidrotic Ectodermal Dysplasia and Tabby Mice. Journal of Clinical Investigation ( 2005), Vol 97 Number 11 June 2426-2432.
Ketterer, K; Rao, S; Friess, H; Weiss, J; Buechler, M; Korc, M. RT-PCR analysis of laser-captured cells points to potential paracrine and autocrine actions on neurotrophins in pancreatic cancer. submitted ( 2005), submitted.
Howard A, Tamas G, Soltesz I. Lighting the chandelier: new vistas for axo-axonic cells. Trends in Neurosciences ( 2005), Jun;28(6):310-6.
Jonathan Chen, S. Joshua Swamidass, Yimeng Dou, Jocelyne Bruand, Pierre Baldi. . ChemDB: A Public Database of Small Molecules and Related Chemoinformatics Resources. Bioinformatics ( 2005), 21(22):4133-4139.
S. Joshua Swamidass, Jonathan Chen, Peter Phung, Jocelyne Bruand, Liva Ralaivola, and Pierre Baldi. . Kernels for Small Molecules and the Prediction of Mutagenicity, Toxicity, and Anti-Cancer Activity. . Proceedings of the 2005 Conference on Intelligent Systems for Molecular Biology, ISMB 05. Bioinformatics ( 2005), 21, Supplement 1, i359-368.
S. A. Danziger, S. J. Swamidass, J. Zeng, L. R. Dearth, Q. Lu, J. H. Chen, J. Cheng, V. P. Hoang, H. Saigo, R. Luo, P. Baldi, Rainer K. Brachmann, and Richard H. Lathrop. . Functional census of mutation sequence spaces: The example of p53 cancer rescue mutants. . IEEE Transactions on Computational Biology and Bioinformatics ( 2005), .
Kauffman AS, Buenzle J, Fraley GS, Rissman EF.. Effects of galanin-like peptide (GALP) on locomotion, reproduction, and body weight in female and male mice.. Hormones and Behavior ( 2005), Aug;48(2):141-51..
Jennifer Buenzle, Marta Wietrzych, Hamid Meziane, Andree Krust, Pierre Chambon, Wojciech Krezel. The Role of Estrogen Receptor Beta and the Stress Response in Fear Conditioned Behaviors. Society for Behavioral Neuroendocrinology Annual Meeting; Abstract printed in Hormones and Behavior ( 2005), .
Wei SH, Rosen H, Matheu MP, Sanna MG, Wang SK, Jo E, Wong CH, Parker I, Cahalan MD. Sphingosine 1-phosphate type 1 receptor agonism inhibits transendothelial migration of medullary T cells to lymphatic sinuses. Nature Immunology ( 2005), Dec;6(12):1228-35..
Zhang R, Minh T, Lezondra L, Korolev S, Moy SF, Collart F, Joachimiak A. 1.6 A crystal structure of YteR protein from Bacillus subtilis, a predicted lyase. Proteins ( 2005), 60(3):561-5.
S. J. Swamidass, J. Chen, P. Phung, J. Bruand, L. Ralaivola, and P. Baldi. . Kernels for Small Molecules and the Prediction of Mutagenicity, Toxicity, and Anti-Cancer Activity. . Proceedings of the 2005 Conference on Intelligent Systems for Molecular Biology, ISMB 05. ( 2005), Bioinformatics, 21, Supplement 1, i359-368.
J. Chen*, S. J. Swamidass*, Y. Dou, J. Bruand, and P. Baldi.. ChemDB: A Public Database of Small Molecules and Related Chemoinformatics Resources. . Bioinformatics; ( 2005), 15;21:4133-9.
Chang, J.E., Bai, J.Y., Marsala, M., Cullington, H.E., Zeng, F.G.. Lows are the New Highs: Improving Speech Intelligibility with Unintelligible Low-Frequency Sounds. Conference on Implantable Auditory Prostheses ( 2005), Pacific Grove, CA.
Echegoyen JC, Soltesz I.. Mini-I on epilepsy. Focus on "Changes in mIPSCs and sIPSCs after kainate treatment: evidence for loss of inhibitory input to dentate granule cells and possible compensatory responses".. Journal of Neurophysiology ( 2005), Aug;94(2):903-4.
Winter WR, Nunez PL. A Study Of The Interaction Between Coupled Nonlinear Oscillators: A Metaphor For Brain Wave Dynamics. Tulane Biomedical Engineering Undergraduate Research and Design Conference ( 2005), .
A. Razmara, D.N. Krause, and S.P. Duckles. Testosterone Augments Endotoxin-mediated Cerebrovascular Inflammation in Male Rats. American Journal of Physiology: Heart and Circulatory Physiology ( 2005), 289: H1843-50.
Puckett JL, Liu J, Bhalla V, Krinsky ML, Hassanein T and Mittal RK. Ultrasound system to measure esophageal varix pressure: an in vitro validation study. Am J Physiol Gastrointest Liver Physiol ( 2005), 288(5):G914-9.
Liu J, Puckett JL, Takeda T, Jung HY and Mittal RK.. Crural diaphragm inhibition during esophageal distension correlates with contraction of the esophageal longitudinal muscle in cats. Am J Physiol Gastrointest Liver Physiol ( 2005), 288(5):G927-32.
Jung HY, Puckett JL, Bhalla V, Rojas-Feria M, Bhasgava V, Liu Jianmin and Mittal RK. Asynchrony between the circular and the longitudinal muscle contraction in patients with nutcracker esophagus. Gastroenterology ( 2005), 128(5):1179-86.
Puckett JL, Bhalla V, Liu J, Kassab GS and Mittal RK. Oesophageal wall stress and muscle hypertrophy in high amplitude oesophageal contractions. Neurogastroenterol Motil ( 2005), 17(6):791-9.
Mittal RK, Liu J, Puckett JL, Bhalla V, Bhargave B, Tipnis N and Kassab G. Sensory and Motor Function of the Esophagus: Lessons from Ultrasound Imaging. Gastroenterology ( 2005), 128(2):487-97.
Miller MJ, Hejazi AS, Wei SH, Cahalan MD, Parker I. T cell repertoire scanning is promoted by dynamic dendritic cell behavior and random T cell motility in the lymph node. PNAS ( 2004), 101(4):998-1003.
Ratzliff AH, Howard AL, Santhakumar V, Osapay I, Soltesz I. Rapid deletion of mossy cells does not result in a hyperexcitable dentate gyrus: implications for epileptogenesis. J Neurosci ( 2004), Mar 3;24(9):2259-69.
Foldy C, Aradi I, Howard A, Soltesz I. Diversity beyond variance: modulation of firing rates and network coherence by GABAergic subpopulations. Eur J Neurosci ( 2004), Jan;19(1):119-30.
Pak KJ. A New Role for Apolipoprotein E and Homocysteine in the Pathogenesis of Alzheimer’s Disease. MSc Dissertation, Oxford University ( 2004), Oxford, United Kingdom.
Lee, D.J. and Robinson, W.E., Jr.. Human immunodeficiency virus type 1 (HIV-1) integrase: resistance to diketoacid integrase inhibitors impairs HIV-1 replication, integration, and confers cross-resistance to L-chicoric acid. . Journal of Virology ( 2004), 78:5835-5847 .
Reinke, R.A., Lee, D.J., McDougall, B.R., King, P.J., Victoria, J., Mao, Y., Lei, X., Reinecke, M.G., and Robinson, W.E., Jr.. L-chicoric acid inhibits human immunodeficiency virus type 1 (HIV-1) integration in vivo and is a non-competitive but reversible inhibitor of HIV-1 integrase in vitro.. Virology ( 2004), 326:203-219 .
Hess KL, Donahue AC, Ng KL, Moore TI, Oak J, Fruman DA.. Frontline: The p85alpha isoform of phosphoinositide 3-kinase is essential for a subset of B cell receptor-initiated signaling responses.. Eur J Immunol ( 2004), 34(11):2968-76.
Russo-Neustadt AA, Alejandre H, Garcia C, Ivy AS, Chen MJ.. Hippocampal brain-derived neurotrophhic factor expression following treatment with reboxetine, citalopram, and physical exercise.. Neuropsychopharmacology ( 2004), Dec; 29(12):2189-99.
Mockler TC, Yu X, Shalitin D, Parikh D, Michael TP, Liou J, Huang J, Smith Z, Alonso JM, Ecker JR, Chory J, Lin C.. Regulation of flowering time in Arabidopsis by K homology domain proteins.. Proc Natl Acad Sci U.S.A. ( 2004), 101(34):12759-64..
J. Wong, T. Xu, A. Husain, H. Le, and S. Molloi. Effect of area x-ray beam equalization on image quality and dose in digital mammography. Physics in Medicine and Biology ( 2004), 49(16): p. 3539-57.
Bhalla V, Liu J, Puckett JL and Mittal RK. Symptom hypersensitivity to acid infusion is associated with hypersensitivity of esophageal contractility. Am J Physiol Gastrointest Liver Physiol ( 2004), 287:G65-71.
Polad M. Shikhaliev, Tong Xu, Huy Le, and Sabee Molloi . Scanning-slit photon counting x-ray imaging system using a microchannel plate detector. Medical Physics ( 2004), Volume 31, Issue 5, pp. 1061-1071 .
J. Wong, T. Xu, A. Husain, H. Le, and S. Molloi,. Effect of area x-ray beam equalization on image quality and dose in digital mammography. Physics in Medicine and Biology ( 2004), 49(16): p. 3539-57..
Tsai HC; Chang H; Barsky SH . Atypical ductal hyperplasia presenting as pseudomicrocalcifications. Breast J ( 2003), 9(1):39-40.
Miller MJ, Wei SH, Cahalan MD, Parker I. Autonomous T cell trafficking examined in vivo with intravital two-photon microscopy. Proc Natl Acad Sci U S A ( 2003), Mar 4;100(5):2604-9.
Rao, SD; Yin, HZ; Weiss, JH.. Disruption of glial glutamate transport by reactive oxygen species produced in motor neurons. Journal of Neuroscience ( 2003), Apr 1;23(7):2627-33.
Rao, S; Yin, HZ; Weiss, JH. Disruption of Astrocytic Glutamate Transport by Reactive Oxygen Species Produced in Motor Neurons in Response to Excitotoxic Activation: An In Vitro Model of ALS Pathogenesis. Annual Meeting of the American Academy of Neurology ( 2003), .
Cahalan MD, Parker I, Wei SH, Miller MJ. Real-time imaging of lymphocytes in vivo. Curr. Opin. Immunol. ( 2003), 15(4):372-7.
Wei SH, Parker I, Miller MJ, Cahalan MD. A stochastic view of lymphocyte motility and trafficking within the lymph node. Immunol. Rev. ( 2003), 195:136-59.
Pak KJ, Chan SL, Mattson MP. Homocysteine and Folate Deficiency Sensitize Oligodendrocytes to the Cell Death-Promoting Effects of a Presenilin-1 Mutation and Amyloid Beta-Peptide. Neuromolecular Med ( 2003), 3(2):119-28.
Pak K, Chan SL, Mattson MP. Presenilin-1 mutation sensitizes oligodendrocytes to glutamate and amyloid toxicities and exacerbates white matter damage and memory impairment in mice. Neuromolecular Med ( 2003), 3(1):53-64.
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